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Core Bioinformatics group

 
Read more at: ClustAssess is on biorxiv!

ClustAssess is on biorxiv!

4 February 2022

A new preprint (describing ClustAssess) is on bioarxiv: “ ClustAssess: tools for assessing the robustness of single-cell clustering ” by Arash Shahsavari, Andi Munteanu, and Irina Mohorianu. https://www.biorxiv.org/content/10.1101/2022.01.31.478592v1 The ClustAssess package is available on CRAN: https://cran.r-project.org/...


Read more at: bulkAnalyseR is on biorxiv!

bulkAnalyseR is on biorxiv!

4 February 2022

A new preprint (describing bulkAnalyseR) is on bioarxiv: “ bulkAnalyseR: An accessible, interactive pipeline for analysing and sharing bulk sequencing results ” by Ilias Moutsopoulos, Eleanor C Williams, and Irina Mohorianu. https://www.biorxiv.org/content/10.1101/2021.12.23.473982v1 The bulkAnalyseR package is available...


Read more at: feamiR is presented at the Heidelberg Non-coding genome symposium by Eleanor

feamiR is presented at the Heidelberg Non-coding genome symposium by Eleanor

14 October 2021

The feamiR tool , for predicting microRNA/mRNA interactions is presented at the Non-coding genome symposium in Heidelberg! Well done, Eleanor! http://bioinf.stemcells.cam.ac.uk:3838/feamiR_Zi0LIRjPjkQpn1UCZeXh/


Read more at: The Noise paper is presented at UKCBCB, NRP by Ilias

The Noise paper is presented at UKCBCB, NRP by Ilias

1 October 2021

Ilias is presenting the Noise paper ( https://academic.oup.com/nar/article/49/14/e83/6291165 ) at the UK Conference of Bioinformatics and Computational Biology, organised at the Earlham Institute, Norwich Research Park, UK. Well done, Ilias!


Read more at: The Split manuscript is presented at UKCBCB, NRP by Eleanor

The Split manuscript is presented at UKCBCB, NRP by Eleanor

1 October 2021

Eleanor is presenting the Split manuscript ( https://www.biorxiv.org/content/10.1101/2021.05.10.443429v1 ) at the UK Conference of Bioinformatics and Computational Biology, organised at the Earlham Institute, Norwich Research Park, UK. Well done, Eleanor! https://github.com/Core-Bioinformatics/split-manuscript/blob/main/...


Read more at: We welcome Alex and Andi!

We welcome Alex and Andi!

4 July 2021

We welcome Alex Calderwood (post-doc) and Andi Munteanu (intern) to the group. We're looking forward to some interesting science!


Read more at: noisyR is now published in NAR

noisyR is now published in NAR

4 July 2021

Illias' paper was acceped in NAR!! Well done, Ilias! noisyR: Enhancing biological signal in sequencing datasets by characterising random technical noise I. Moutsopoulos , L. Maischak, E. Lauzikaite , S. A. Vasquez Urbina, E. C. Williams , H. G. Drost, I. Mohorianu https://academic.oup.com/nar/advance-article/doi/10.1093/...


Read more at: The sum of two halves may be different from the whole. Effects of splitting sequencing samples across lanes.

The sum of two halves may be different from the whole. Effects of splitting sequencing samples across lanes.

11 May 2021

A new methods paper from our group was submitted to bioRxiv! The sum of two halves may be different from the whole. Effects of splitting sequencing samples across lanes. Eleanor C Williams, Ruben Chazarra-Gil, Arash Shahsavari, Irina Mohorianu https://www.biorxiv.org/content/10.1101/2021.05.10.443429v1 Well done Eleanor...


Read more at: Mapping the biogenesis of forward programmed megakaryocytes from induced pluripotent stem cells

Mapping the biogenesis of forward programmed megakaryocytes from induced pluripotent stem cells

3 May 2021

A new paper in collaboration with Dr Cedric Ghevaert has been submitted to biorXiv Mapping the biogenesis of forward programmed megakaryocytes from induced pluripotent stem cells Moyra Lawrence, Arash Shahsavari, Susanne Bornelöv , Thomas Moreau, Katarzyna Kania, Maike Paramor, Rebecca McDonald, James Baye, Marion Perrin...


Read more at: Welcome Toby!

Welcome Toby!

3 May 2021

We welcome a new member of the group - Toby Milne Clark! https://www.corebioinf.stemcells.cam.ac.uk/staff/toby-milne-clark


The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest